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Our June C3 session will feature a round of lightning talks from several UCSF labs doing computational cancer research.  

  • Andrew Clugston, PhD (Sweet-Cordero Lab) - "High-confidence mapping of oncogenic structural changes in osteosarcoma"
  • Daniel Zamler, PhD (Costello Lab) - TBD
  • Xiaolin Zhu, MD, PhD (Quigley Lab) - TBD
  • Jon Akutagawa, PhD (Huang Lab) - "Characterizing prostate cell heterogeneity across ancestrally diverse populations.”
  • Madhumita Sushil, PhD (Butte Lab) - "CORAL: Expert-Curated Oncology Reports to Advance Language Model Inference"
  • Arda Demirci (Huang Lab) - Attention-based Models for Prostate Cancer

This meeting will be hybrid – attend in person in HD 160 (1450 3rd St) or by Zoom. Coffee and bagels will be served.


This a recurring monthly meeting focused on cancer genomics and computational cancer biology and oncology. It provides a forum for UCSF labs to share largely unpublished work and to get feedback and input.

C3 Faculty Leadership: Joe Costello, Hani Goodarzi, Franklin Huang, Marina Sirota, Alejandro Sweet-Cordero

For more information, please email

Event Details

  • Mingyue Zhou
  • Farnam Mohebi

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